Welcome: an Introduction to this Site
NMRPipe: a Comprehensive Software System for Biomolecular NMR
Special Applications: NMR Drug Screening, Automation, and so on
Dipolar Couplings, Chemical Shifts, and Protein Structure
Miscellaneous

Frank's CV, Recent Slides, and Thesis

 

 

 

  Frank Delaglio, Ph.D.

  Software Science Consultant
  13840 Grey Colt Drive
  North Potomac MD 20878 USA


  Tel: 301 806-0867
  Fax: 301 309-8717
  E-mail: delaglio@nmrscience.com



NMRWish Built-In TCL Functions
writeImage: Create and save an image in TIFF format using three nmrWish spectral data arrays for the red, green, and blue channels. See also: readROI, Stand-alone program pcaNMR, nmrWish function pcaNMR.

Flag Argument Default Description
 -out outName stdout TIFF Image Output File.
 -verb Verbose Mode ON.
Compose Three ROIs into an RGB Image:
 -roiR rID ROI for Red Channel.
 -roiG gID ROI for Green Channel.
 -roiB bID ROI for Blue Channel.
Maping ROI Range onto Image Range. Use these Prefixes:
Red: -iR/-fR Green: -iG/-rG Blue: -iB/-rB All: -iC/-rC
 -iRMin iRMin Image Red Min.
 -iRMax iRMax Image Red Max.
 -rRMin fRMin ROI Red Min.
 -rRMax fRMax ROI Red Max.
Convert an ROI Pixmap to a Color Image.
 -roi roiID ROI for Pixmap.
 -xSize width Output image width, pixels.
 -ySize height Output image height, pixels.
Save a Screen Region as an Image:
 -x gx1 gx3 X Coords of Screen Region.
 -y gy1 gy3 Y Coords of Screen Region.
 -cell cellID Cell ID of Screen Region.
 -screen scrNum Screen Number.
 -root Save region from Root Window.
Image Formats:
 -tiff TIFF Format.
 -gif GIF Format.
 -jpeg JPEG Format (Not supported yet).
 -ps PostScript Format (Not supported yet).
Notes:
  1. An RGB Image will be created if -roiR -roiG or -roiB arguments are found.
  2. Pixmap to Image conversion will performed if an -roi argument is found.
  3. If none of the ROI arguments above are given, a screen region will be captured and saved.
  4. For converting ROI Pixmap to a Color Image, use the same arguments as: drawROI -pix ...

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last updated: Apr 20, 2011 / big frank

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