Welcome: an Introduction to this Site
NMRPipe: a Comprehensive Software System for Biomolecular NMR
Special Applications: NMR Drug Screening, Automation, and so on
Dipolar Couplings, Chemical Shifts, and Protein Structure
Miscellaneous

Frank's CV, Recent Slides, and Thesis

 

  

 

  Frank Delaglio, Ph.D.

   Software Science Consultant
  13840 Grey Colt Drive
  North Potomac MD 20878 USA

  Tel: 301 806-0867
  Fax: 301 309-8717
  E-mail: delaglio@nmrscience.com



NMRWish Built-In TCL Functions
drawSettings: Adjust the parameters for drawing in the spectral graphics area of the screen or PostScript page.

Flag Argument Default Description
 -reset Restore Default Settings.
 -screen Screen Graphics ON (default).
 -page Hardcopy Graphics ON.
TCL/TK Graphics Window Arguments:
 -win wID 1 Canvas Window ID.
 -update Flush graphics after drawing.
 -noupdate Don`t flush graphics after drawing.
Graphics Size and Justification:
 -xOff xOff 0.0 Additional X Offset. Default Unit is Character Size.
 -yOff yOff 0.0 Additional Y Offset. Default Unit is Character Size.
 -lw1d lw 0 Pixel Width for 1D Screen Drawing.
 -lwZero lw 0 Pixel Width for Zero Line Drawing.
 -thick Use thick line width.
 -thin Use thin line width.
 -big Use larger Font Size.
 -small Use smaller Font Size.
 -left Left-Justify (Default).
 -right Right-Justify (Hard-Copy Only).
 -center Centered (Hard-Copy Only).
 -rotate deg 0.0 Rotation, Degrees (Hard-Copy Only).
Graphics Coords In Terms of ROI Spectral Location:
 -roiX roiXID ROI ID for Graphic X Coord.
 -roiY roiYID ROI ID for Graphic Y Coord.
 -roiRef roiID Sets Both -roiX and -roiY.
 -fold Use Folding of Coords (Default).
 -nofold No Folding of Coords.
Graphics Coords In Terms of Existing Cell:
 -cellX cellXID Cell ID for Graphic X Coord.
 -cellY cellYID Cell ID for Graphic Y Coord.
 -cell cellID Sets Both -cellX and -cellY.
 -clip Clip to Extent of Cell.
 -noclip No Clipping.
Bounding Box:
 -box Draw Bounding Box.
 -nobox No Bounding Box.
Hard Copy Plot Settings:
 -plotName pName roi.ps PostScript Output Name.
 -plotCmnd pCmnd echo Printing Command.
 -plotFont pFont Helvetica Font Name.
Hard Copy Color Use:
 -color Color PostScript.
 -gray Grayscale (Default).
 -bw Solid Black/White Only.
Paper Type and Orientation:
 -paper pType A Paper Type (see below).
 -tray tNum 0 Paper Tray.
 -landscape Landscape (default).
 -portrait Portrait.
Paper Size-to-Pixel Conversion (Use Only One):
 -ppi ppiVal 720 Pixels per inch.
 -ppc ppcVal 283 Pixels per centimeter.
Accessible Page Limits, in Units of inches, cm, or mm:
 -pageX1 px1 1/8 Page Limit X1.
 -pageY1 py1 1/8 Page Limit Y1.
 -pageX3 px3 pWi - 1/8 Page Limit X3.
 -pageY3 py3 pHi - 1/8 Page Limit Y3.
Hard Copy Font Sizes, in Units of inches, cm, or mm:
 -c1Width ch1w 0.10in Regular Font Width.
 -c1Height ch1h 0.14in Regular Font Height.
 -c2Width ch1w 0.14in Large Font Width.
 -c2Height ch1x 0.20in Large Font Height.
Line Thickness, in Printer Points:
 -lw1 lw1 0.1 Thin linewidth (grids).
 -lw2 lw2 1.0 Thick linewidth (boxes).
 -lwPlus lwp 0.1 Positive contour width.
 -lwMinus lwm 1.0 Negative contour width.
Paper Size (Set Automatically by Paper Type/Orientation):
 -pageWidth pWi 11.0in Page Width.
 -pageHeight pHi 8.5in Page Height.
Paper Types:
  Size A1 59.40 x 84.10 cm
  Size A2 42.00 x 59.40 cm
  Size A3 29.70 x 42.00 cm
  Size A4 21.00 x 29.70 cm
  Size A5 14.80 x 21.00 cm
  Size A6 10.50 x 14.80 cm
  Size A7 7.40 x 10.50 cm
  Size A 8.50 x 11.00 inches
  Size B 11.00 x 17.00 inches
  Size C 17.00 x 22.00 inches
  Size D 22.00 x 34.00 inches
  Size E 34.00 x 44.00 inches
  Size U 10.00 x 10.00 inches
Color and Overlay Options:
 -fg fgClr yellow Foreground Color Name.
 -bg bgClr none Background Color Name.
 -mask mVal -1 Plane Mask. -1=All Planes.
 -x11GX xID copy X11 Draw Mode ID/Keyword.
ROI Drawing Color Parameters:
 -color1 pClr Multi Color for Positive Levels.
 -color2 nClr Multi Color for Negative Levels.
 -colorA aClr yellow Color for Axis Text Drawing.
 -colorS sClr black Color for Axis Text Shadow.
 -colorG gClr dimGray Color for Grid Drawing.
 -plane 0 Overlay Plane to Use.
1D Drawing with Color Fill:
 -fillColor1 fc1 -1 Positive Fill Color
 -fillColor2 fc2 -1 Negative Fill Color
 -fillColor fc -1 Sets Both Fill Colors.
Positive Level HSV Color Vector:
 -pcc pCount 10 Positive Color Count.
 -pHue1 hue 0.5] First Hue [0-1 .
 -pHueN hue 0.7] Last Hue [0-1 .
 -pSat1 saturation 0.8] First Saturation [0-1 .
 -pSatN saturation 1.0] Last Saturation [0-1 .
 -pVal1 value 1.0] First Value [0-1 .
 -pValN value 1.0] Last Value [0-1 .
Negative Level HSV Color Vector:
 -ncc nCount 10 Negative Color Count.
 -nHue1 hue 0.5] First Hue [0-1 .
 -nHueN hue 0.7] Last Hue [0-1 .
 -nSat1 saturation 0.8] First Saturation [0-1 .
 -nSatN saturation 1.0] Last Saturation [0-1 .
 -nVal1 value 1.0] First Value [0-1 .
 -nValN value 1.0] Last Value [0-1 .
Arguments for Report Generation:
 -noverb Verbose Mode Off.
 -verb Verbose Mode On.

[ Home ] [ Terms of Use ] [ Copyright ]
last updated: Apr 20, 2011 / big frank

Contact site designer mimi at mdelaglio@hotmail.com