Scripts of the NMRPipe System
vina.tcl: Summarize TALOS predictions in a single table.

Flag	Argument	Default	Description
`-predDir`	`pDir`	`pred`	Directory of existing predictions.
`-talosDir`	`mDir`	`.`	TALOS Main Directory: TALOS_DIR.
`-in`	`inName`	`None`	Input shift table used previously.
`-ref`	`refName`	`None`	Reference PDB for testing.
`-sum`	`sumName`	`pred.tab`	Prediction summary output name.
`-map`	`mapName`	`vina.dat`	Ramachandran Binary Map name.
`-count`	`mc`	`10`	Max match count per triplet.
`-dPhi`	`phiDev`	`35.0`	Max Allowable Phi Std Deviation.
`-dPsi`	`psiDev`	`35.0`	Max Allowable Psi Std Deviation.
`-lim`	`limDeg`	`35.0`	Limit for 'Near Test'.
`-auto`			Automatic classification (Default).
`-noauto`			No automatic classification.

Examples:
vina.tcl -in ubiqCS.tab
vina.tcl -in ubiqCS.tab -ref xray.pdb
See also:
talos.tcl Creates predictions by shift homology.
rama.tcl Graphical interface to inspect results.

Frank Delaglio, Ph.D.