Scripts of the NMRPipe System
stripPlot.tcl: PostScript Strip Plots of a Single 3D Spectrum.
| Flag |
Argument |
Default |
Description |
-in |
inName |
ft/test%03d.ft3 |
3D Spectral data file template. |
-tab |
tabName |
hn.tab |
2D Table for strip locations. |
-hi |
contHi |
Auto |
First contour height. |
-plev |
nPos |
10 |
Number of Positive Contours. |
-nlev |
nNeg |
10 |
Number of Negative Contours. |
-mult |
mult |
2.0 |
Factor for Auto contour height. |
Plot Format:
-paper |
pSize |
A |
Paper Size (A-E, U, A1-A7). |
-strips |
sCount |
10 |
Max Strips Per Page. |
-tray |
trayID |
0 |
Paper Tray Number. |
-portrait |
|
|
Plot in Portrait Mode. |
-landscape |
|
|
Plot in Landscape Mode. |
Strip Axis Names:
-xName |
xName |
Auto |
First axis name of strip 2D coord. |
-yName |
yName |
Auto |
Second axis name of strip 2D coord. |
-zName |
zName |
Auto |
Axis name of strip dimension. |
Strip Region Widths:
-xw |
xw |
0.12ppm |
X-Axis +/- Width |
-yw |
yw |
0.80ppm |
Y-Axis +/- Width (For Two-Strip Mode). |
-zw |
zw |
1 |
Z-Axis +/- Width (For Srip Projection). |
Strip Region Limits, ppm, Hz, pts or %:
-z1 |
zStart |
0% |
Strip Starting Coord. |
-zn |
zEnd |
100% |
Strip Ending Coord. |
Coordinate Table Names:
-xVar |
xVar |
Auto |
Variable name of first 2D PPM coord. |
-yVar |
yVar |
Auto |
Variable name of second 2D PPM coord. |
Single/Pairwise Strip Plotting
-nopair |
|
|
Plot One Strip Per 2D Coord (Default). |
-pair |
|
|
Plot Two Complementary Strips Per 2D Coord. |
Strip Labels and Colors:
-posColor |
pColor |
black |
Color For Positive Contours. |
-negColor |
nColor |
red |
Color For Negative Contours. |
-lab |
lVar |
None |
Variable Name for Strip Label. |
-rightAxis |
|
|
Include Axis for Rightmost Strips. |
|
|
