Scripts of the NMRPipe System
rotPCS.tcl: Rotate PDB Structure onto One or More PCS Alignment Frames.
Input Files:
| Flag |
Argument |
Default |
Description |
-pdb |
pdbName |
ref.pdb |
PDB Input File |
-in |
dcInList |
pcsCalc*.tab |
PCS Input Tables |
PDB Output Files:
-out |
outName |
rot.pdb |
Structures Rotated Onto Alignment Frames. |
-rel |
relName |
rel.pdb |
Relative Alignment Frames on Structure. |
-tmp |
tmpName |
tmp.pdb |
Temporary Output Name. |
Other Options:
-tList |
tIDList |
* |
Tensors to Use. |
-scale |
s |
1.0 |
Tensor Size Scale Factor. |
-axis |
|
|
Insert Axis Information (Default). |
-noaxis |
|
|
No Axis Information. |
-halo |
|
|
Insert Halo Information. |
-nohalo |
|
|
No Halo Information (Default). |
-ignore |
|
|
Ignore Segment Name Info. |
-verb |
|
|
Verbose Mode ON (Default). |
-noverb |
|
|
Verbose Mode OFF. |
Notes:
PCS input tables must have DATA for tensor PCS_EULER and G_XYZ.
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