Welcome: an Introduction to this Site
NMRPipe: a Comprehensive Software System for Biomolecular NMR
Special Applications: NMR Drug Screening, Automation, and so on
Dipolar Couplings, Chemical Shifts, and Protein Structure
Miscellaneous

Frank's CV, Recent Slides, and Thesis

 

 

 

  Frank Delaglio, Ph.D.

  Software Science Consultant
  13840 Grey Colt Drive
  North Potomac MD 20878 USA


  Tel: 301 806-0867
  Fax: 301 309-8717
  E-mail: delaglio@nmrscience.com



Scripts of the NMRPipe System
plotTab.tcl: X/Y Plots of Columns from NMRPipe-Format Tables.

Flag Argument Default Description
 -in inName Input Table.
 -xSize xSize Graph X-Axis Dimension Size, Pixels.
 -ySize ySize Graph Y-Axis Dimension Size, Pixels.
 -x xVarList Table Variables for X-Axis of Plot.
 -y yVarList Table Variables for Y-Axis of Plot.
 -z labelVar Table Variable for Point Labels in Plot.
 -zc labelColorVar Table Variable for Point Color.
 -select cond 1 GDB Selection Condition for Table Entries to Use.
 -xMin xMinList Optional X-Axis Lower Bounds.
 -xMax xMaxList Optional X-Axis Upper Bounds.
 -yMin yMinList Optional Y-Axis Lower Bounds.
 -yMax yMaxList Optional Y-Axis Upper Bounds.
 -xUndef xUndefVal Value for Undefined X-Axis Data.
 -yUndef yUndefVal Value for Undefined Y-Axis Data.
 -hN histBins Number of Histogram Bins
 -xStep xAxisStep X-Axis Step.
 -hStep histAxisStep Histogram Axis Step.
 -lw lineWidthList Linewidths for Plot, Pixels.
 -pw pointWidthList Point Sizes for Plot, Pixels.
 -lColor lineColorList Line Colors for Plot.
 -pColor pointColorList Point Colors for Plot.
 -zColor labelColor Label Colors for Plot.
 -zFmt zFormat Printing Format for Labels.
 -bg bgColor Background Color for Plot.
 -line refLineCoordList Reference Line Information (x1 y1 yn yn color linewidth)

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last updated: Apr 20, 2011 / big frank

Contact site designer mimi at mdelaglio@hotmail.com