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Frank
Delaglio, Ph.D.
Software Science Consultant
13840 Grey Colt Drive
North Potomac MD 20878 USA
Tel: 301 806-0867
Fax: 301 309-8717
E-mail: delaglio@nmrscience.com
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Scripts of the NMRPipe System
mfr2euler.tcl: Estimate Relative Tensor Angles from Molecular Fragment Search.
| Flag |
Argument |
Default |
Description |
-in |
dcList |
dObs*.tab |
Input DC Tables. |
-mfr |
mfrName |
mfr.tab |
Input Fragment Table. |
-maxRank |
maxRank |
5 |
Maximum Allowable Rank. |
-dcNMin |
nMin |
15 |
Minimum Allowable Coupling Count. |
-frac |
f |
0.1 |
Fraction of Best Fragments to Use. |
-alpha |
alpha |
3.0 |
Exponential Weighting Factor. |
-r1 |
r1 |
First |
First Residue in Range. |
-rN |
rN |
Last |
Last Residue in Range. |
PDB Input Sources:
-pdbDir |
pdbDir |
PDBH_DIR |
PDB Input Directory. |
-fragDir |
fragDir |
None |
Alternate Fragment Input Directory. |
-useFragName |
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Use FRAG_NAME for fragment name. Otherwise, RES1 RESN RANK are used. |
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last updated: Jan 22, 2009 / big frank
Contact site designer mimi at
mdelaglio@hotmail.com
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