Frank Delaglio, Ph.D.

19804 Maycrest Way
Germantown MD 20876 USA

301 806-0867
delaglio@nmrscience.com



Scripts of the NMRPipe System
mfr2dyn.tcl: DYNAMO Torsion or AC Restraints from MFR Search.

Flag Argument Default Description
 -mfr mfrName mfr.tab Input Fragment Table.
 -pdb pdbName ext.pdb PDB File Input.
 -torsion tName torsions.tab Torsion Table Output (Or None).
 -ac acName ac.tab AC Table Output (Or None).
 -seg segName PROT Segment Name for Output.
 -atom aNames C CA N Atom Names for AC Restraints.
 -r1 r1 First First Residue in Output Range.
 -rN rN Last Last Residue in Output Range.
 -pdbDir pdbDir PDBH_DIR Location of MFR PDB Files.
 -maxRank maxRank 10 Max Rank of Fragments.
 -acFC acFC 10.0 AC Force Constant Scale.
 -tFC tFC 1.0 Torsion Force Constant Scale.
 -dPhi dPhi 15.0 Torsion Phi +/- Range, Degrees.
 -dPsi dPsi 15.0 Torsion Psi +/- Range, Degrees.
 -id firstID 1 First Restraint ID Number.