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Frank
Delaglio, Ph.D.
Software Science Consultant
13840 Grey Colt Drive
North Potomac MD 20878 USA
Tel: 301 806-0867
Fax: 301 309-8717
E-mail: delaglio@nmrscience.com
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Scripts of the NMRPipe System
mapPDB.tcl: Map DYNAMO Table Data onto PDB File.
| Flag |
Argument |
Default |
Description |
-in |
inPDBName |
ref.pdb |
PDB Input. |
-out |
outPDBName |
map.pdb |
PDB Output. |
-tab |
inTabName |
eval.tab |
Table Input. |
-inVar |
inVar |
ANGLE_VIO |
Input Variable from Table. |
-outVar |
outVar |
TEMPFACTOR |
Output Variable in PDB. |
-vDef |
vDef |
0.0 |
Default Value for Output. |
-vMin |
vMin |
0.0 |
Lower Range of Output. |
-vMax |
vMax |
999.0 |
Upper Range of Output. |
-select |
cond |
1 |
Table Selection Condition. |
-all |
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Map Values Onto Entire Residues. |
-abs |
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Use Absolute Value of Input. |
-avg |
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Use Average Values. |
-seg |
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Use Seg Name Info. |
-noseg |
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Ignore Seg Name Info (Default). |
Notes:
Use keywords 'tMin' and 'tMax' to set vMin and vMax according to the min and max values in the input table.
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last updated: Jan 22, 2009 / big frank
Contact site designer mimi at
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