Frank Delaglio, Ph.D.

Software Science Consultant
325 Union Avenue #212
Campbell CA 95008 USA

301 806-0867

Scripts of the NMRPipe System
mapPDB.tcl: Map DYNAMO Table Data onto PDB File.

Flag Argument Default Description
 -in inPDBName ref.pdb PDB Input.
 -out outPDBName map.pdb PDB Output.
 -tab inTabName Table Input.
 -inVar inVar ANGLE_VIO Input Variable from Table.
 -outVar outVar TEMPFACTOR Output Variable in PDB.
 -vDef vDef 0.0 Default Value for Output.
 -vMin vMin 0.0 Lower Range of Output.
 -vMax vMax 999.0 Upper Range of Output.
 -select cond 1 Table Selection Condition.
 -all Map Values Onto Entire Residues.
 -abs Use Absolute Value of Input.
 -avg Use Average Values.
 -seg Use Seg Name Info.
 -noseg Ignore Seg Name Info (Default).
  Use keywords 'tMin' and 'tMax' to set vMin and vMax according to the min and max values in the input table.