Scripts of the NMRPipe System
fixPDB.tcl: Adjust a PDB for use in TALOS/DYNAMO database applications.

Flag	Argument	Default	Description
`-in`	`inPDBName`		Input PDB File.
`-out`	`outPDBName`		Output PDB File.
`-seg`	`segName`		Segment Name for Output PDB.
`-gmc`	`gmcName`		GMC Directory Name, if Needed to Add Protons.
`-gap`	`maxPDBGap`		Maximum Allowable Missing Residue Count.
`-addH`			Force Addition of Protons via DYNAMO Annealing.