Welcome: an Introduction to this Site
NMRPipe: a Comprehensive Software System for Biomolecular NMR
Special Applications: NMR Drug Screening, Automation, and so on
Dipolar Couplings, Chemical Shifts, and Protein Structure
Miscellaneous

Frank's CV, Recent Slides, and Thesis

 

  

 

  Frank Delaglio, Ph.D.

   Software Science Consultant
  13840 Grey Colt Drive
  North Potomac MD 20878 USA

  Tel: 301 806-0867
  Fax: 301 309-8717
  E-mail: delaglio@nmrscience.com



Scripts of the NMRPipe System
conv.tcl: NMRPipe Conversion Script Creation Utility.

Flag Argument Default Description
 -script scriptName Default Output Script Name.
 -ndim dimCount Default Dimension Count.
 -spec spectralType Spectral Type Keyword: NMR.
 -mode convMode Conversion Mode Keyword: SPECTRUM ISIS.
 -inType inProtocol Input Type Keyword: VARIAN etc.
 -outType outProtocol Output Type Kwyword: NMRPIPE etc.
 -cd cdDir Default Directory.
 -t t Default Temperature, Degrees K.
 -info infoReq Addition Arguments for Using Conversion Program to List Spectral Parameters.
 -autoDim Use Automatic Dimension Count Determination (Default).
 -noautoDim No Automatic Dimension Count Determination.
 -auto Operate in Auto Mode.
 -noauto Do Not Operate in Auto Mode (Default).
 -list List Spectrometer Parameters.
 -sleep Add Sleep Command to Conversion Script.
 -nosleep Do Not Add Sleep Command to Conversion Script.
 -verb Verbose Mode ON.
 -noverb Verbose Mode OFF.
Adding arguments to the conversion command:
 -extra eArgs Additional Arguments for Conversion Program.
 -end Marks End of Additional Arguments for Conversion Program.
Special Arguments:
 -dmx Oversampling Conversion (Bruker/JEOL Delta) (Default).
 -amx No Oversampling Conversion.
 -nodmx No Oversampling Conversion.
 -useSW_h Use Bruker SW_h Value for Default Spectral Widths.

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last updated: Jan 22, 2009 / big frank

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