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Frank
Delaglio, Ph.D.
Software Science Consultant
13840 Grey Colt Drive
North Potomac MD 20878 USA
Tel: 301 806-0867
Fax: 301 309-8717
E-mail: delaglio@nmrscience.com
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Programs of the NMRPipe System
seriesTab: Extract Max Values or Sum of regions in an NMRPipe-format Spectral Series, using an NMRPipe-format Peak Table as Input.
| Flag |
Argument |
Default |
Description |
-in |
inTab |
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Input Table. |
-out |
outTab |
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Output Table. |
-list |
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seriesList Text File Which Lists Spectra in Series. |
Measurment Modes:
-max |
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Maximum Intensity. |
-sum |
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Sum of Intensities. (Default Mode). |
-poly |
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Polynomial-Fit Intensity. |
-verb |
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Verbose Mode ON. |
Input Region Size:
-ndim |
nd |
2 |
Dimension Count of Input Region |
-dx |
dxPts |
0 |
+/- X-Axis Pts of Input Region. |
-dy |
dyPts |
0 |
+/- Y-Axis Pts of Input Region. |
-dz |
dzPts |
0 |
+/- Z-Axis Pts of Input Region. |
Fourier Interpolation Options:
-xzf |
xPts |
2dx+1 |
X-Axis Size After Interpolation. |
-yzf |
yPts |
2dy+1 |
Y-Axis Size After Interpolation. |
-zzf |
yPts |
2dz+1 |
Z-Axis Size After Interpolation. |
-adx |
dxPts |
dx |
+/- Pts of Analysis Region. |
-ady |
dyPts |
dy |
+/- Pts of Analysis Region. |
-adz |
dyPts |
dz |
+/- Pts of Analysis Region. |
Notes:
1. When using Fourier Interpolation, specify a small enough analysis region to avoid edge effects.
2. Polynomial mode is unreliable if peak positions change substantially over the series.
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last updated: Jan 22, 2009 / big frank
Contact site designer mimi at
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