Programs of the NMRPipe System 
nlinLS: Non-Linear N-Dimensional Spectral Modeling
 
 
| Flag | 
Argument | 
Default | 
Description | 
 
 -in | 
 | 
 | 
inTable Peak Table Input. | 
 
 -out | 
 | 
 | 
outTable Peak Table Output. | 
 
 -data | 
 | 
 | 
dataName Datafile Name. | 
 
 -list | 
 | 
 | 
listName ND File List Name. | 
 
 
Optional: 
 -w | 
widthList | 
2 ... | 
+/- Points XYZ... | 
 
 -mod | 
modelList | 
GAUSS1D ... | 
Profile names. | 
 
 -mult | 
multName | 
PEAK | 
Multiplet type. | 
 
 -axis | 
axisOrder | 
XYZABC | 
Axis Order List. | 
 
 -tol | 
relFnTol | 
1.0e-08 | 
Func Tolerance. | 
 
 -dig | 
goodDig | 
5 | 
Good Digits. | 
 
 -con | 
confidVal | 
0.95 | 
Confid Interval. | 
 
 -integ | 
integLW | 
3.0 | 
Integral +/- LW. | 
 
 -noise | 
noiseRMS | 
0.0 | 
Noise Estimate. | 
 
 -iter | 
maxIter | 
-1 | 
Iteration count. | 
 
 -iseed | 
seed | 
54321 | 
Random Number Seed. | 
 
 -maxf | 
maxFnEval | 
-1 | 
Func Eval count. | 
 
 -tf | 
truncVal | 
0.0 | 
Truncation factor. | 
 
 -vs | 
volScale | 
1.0 | 
Volume Scale, volumes divided by this factor. | 
 
 -vol | 
volUnits | 
Pts | 
Linewidth Units for Volumes, Pts Hz ppm. | 
 
 -ppm | 
 | 
No | 
Update Hz/ppm Values. | 
 
 -sum | 
 | 
No | 
Volume by sum. | 
 
 -tau | 
 | 
Yes | 
Read Tau Values from Header. | 
 
 -notau | 
 | 
No | 
Use Point Index as Tau. | 
 
 -norm | 
 | 
Off | 
Norm Test of Res. | 
 
 -verb | 
 | 
Off | 
Verbose mode on. | 
 
 
For Constrained Parameters: 
 -fix | 
parm1 ... | 
 | 
Fixed parameters. | 
 
 -delta | 
parm1 X1 ... | 
 | 
Limits P-X1:P+X1. | 
 
 -delta2 | 
parm1 X1 X2 ... | 
 | 
Limits P+X1:P+X2. | 
 
 -limit | 
parm1 X1 X2 ... | 
 | 
Limits P=X1:P=X2. | 
 
 
For TIME1D Profiles: 
 -apod | 
apodName | 
 | 
Filter List Name. | 
 
 -nots | 
 | 
 | 
No Time-Domain Scale. | 
 
 
For MACRO1D Profiles: 
 -macro | 
macName parmCount CLIP | 
 | 
 | 
 
 -macro | 
macName parmCount NOCLIP | 
 | 
 | 
 
 
Optimization Modules: 
 -f77 | 
 | 
 | 
Use F77 Modules. | 
 
 -yz | 
 | 
 | 
Use Yamazaki Modules. | 
 
 
Supported Profile Names: 
  GAUSS1D  LORENTZ1D TIME1D
  COS1D    SIN1D     DCOS1D
  DSIN1D   EXP1A1D   EXP2A1D
  EXP2AB1D GAUSS1A1D SCALE1D
  CTIME1D  GTIME1D   NULL1D
 
Supported Multiplet Types: 
  PEAK JX JY JXY AX
 
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